...

Snakefile

 # define the singularity (https://sylabs.io/) container image to use
 # see also https://cloud.sylabs.io/library/kkmann/default/center-grex-imputation#
-singularity: "library://kkmann/default/center-grex-imputation:sha256.240a821a4cdc6cb013035dc0c4c72ea714299269ed6ca4a6f8f1862b19cd312c"
+singularity: "library://kkmann/default/center-grex-imputation:sha256.811ce3ed0a73d21dc54f9aeceb94185e3804b83a30ab07a0142ab8da86802d6a"
 
 # modify this file to define global parameters
 # (e.g. set of tissues to impute genetically regulated expression levels for)

config/mrc-bsu-cluster/config.yaml

@@ -2,6 +2,6 @@ jobs:               99
 local-cores:        1
 use-singularity:    True
 restart-times:      3
-cluster:            "sbatch -A MRC-BSU-SL2-CPU -p skylake  --nodes 1 --ntasks 1 --cpus-per-task 1 --mem 16000 -t 04:00:00 --job-name '{rule}[{wildcards}]' --output 'logs/{rule}[{wildcards}].log' --error 'logs/{rule}[{wildcards}].log'"
+cluster:            "sbatch -A MRC-BSU-SL2-CPU -p skylake  --nodes 1 --ntasks 1 --cpus-per-task 1 --mem 16000 -t 00:59:00 --job-name '{rule}[{wildcards}]' --output 'logs/{rule}[{wildcards}].log' --error 'logs/{rule}[{wildcards}].log'"
 singularity-args:   "-H $PWD"
 singularity-prefix: "."