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Kevin Kunzmann
impute-gene-expression
Commits
5213438c
Commit
5213438c
authored
Nov 11, 2020
by
Kevin Kunzmann
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Update config.yaml
parent
ae63b888
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config/mrc-bsu-cluster/config.yaml
config/mrc-bsu-cluster/config.yaml
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config/mrc-bsu-cluster/config.yaml
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5213438c
...
...
@@ -2,6 +2,6 @@ jobs: 99
local-cores
:
1
use-singularity
:
True
restart-times
:
3
cluster
:
"
sbatch
-A
MRC-BSU-SL2-CPU
-p
skylake
--nodes
1
--ntasks
1
--cpus-per-task
1
--mem
16000
-t
0
2
:00:00
--job-name
'{rule}[{wildcards}]'
--output
'logs/{rule}[{wildcards}].log'
--error
'logs/{rule}[{wildcards}].log'"
cluster
:
"
sbatch
-A
MRC-BSU-SL2-CPU
-p
skylake
--nodes
1
--ntasks
1
--cpus-per-task
1
--mem
16000
-t
0
4
:00:00
--job-name
'{rule}[{wildcards}]'
--output
'logs/{rule}[{wildcards}].log'
--error
'logs/{rule}[{wildcards}].log'"
singularity-args
:
"
-H
$PWD"
singularity-prefix
:
"
."
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