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GOSe-6mo-imputation-paper
GOSe-6mo-imputation-paper
Commit f0907e10 authored by Kevin's avatar Kevin
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singularity-container-recipe
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...@@ -12,8 +12,8 @@ From: rocker/verse:latest ...@@ -12,8 +12,8 @@ From: rocker/verse:latest
%help %help
CENTER-TBI 6 months GOSe outcome imputation, CENTER-TBI 6 months GOSe outcome imputation,
cf. https://git.center-tbi.eu/kunzmann/gose-6mo-imputation for details. cf. https://git.center-tbi.eu/kunzmann/gose-6mo-imputation for details.
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snakemake_on_slurm_cluster
View file @ f0907e10
#!/bin/bash #!/bin/bash
# single input: snakemake target
nohup snakemake $1 --use-singularity -j 99 --cluster-config cluster.json --cluster "sbatch -A {cluster.account} -p {cluster.partition} -n {cluster.n} -c {threads} -t {cluster.time}" & nohup snakemake $1 --use-singularity -j 99 --cluster-config cluster.json --cluster "sbatch -A {cluster.account} -p {cluster.partition} -n {cluster.n} -c {threads} -t {cluster.time}" &
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