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f0907e10 · Kevin · f01d4c08 · f0907e10 · f0907e10
Commit f0907e10 authored Mar 20, 2019 by Kevin
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singularity-container-recipe singularity-container-recipe +2 -2

snakemake_on_slurm_cluster snakemake_on_slurm_cluster +1 -1

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--- a/singularity-container-recipe
+++ b/singularity-container-recipe
@@ -12,8 +12,8 @@ From: rocker/verse:latest

 %help

-CENTER-TBI 6 months GOSe outcome imputation,
-cf. https://git.center-tbi.eu/kunzmann/gose-6mo-imputation for details.
+    CENTER-TBI 6 months GOSe outcome imputation, 
+    cf. https://git.center-tbi.eu/kunzmann/gose-6mo-imputation for details.




--- a/snakemake_on_slurm_cluster
+++ b/snakemake_on_slurm_cluster
 #!/bin/bash
-# single input: snakemake target
+
 nohup snakemake $1 --use-singularity -j 99 --cluster-config cluster.json --cluster "sbatch -A {cluster.account} -p {cluster.partition} -n {cluster.n} -c {threads} -t {cluster.time}" &