Skip to content

impute-gene-expression
impute-gene-expression
Commit aeec8e69 authored by Kevin Kunzmann's avatar Kevin Kunzmann
Browse files
Options

...

parent b6e502f6
Hide whitespace changes
Inline Side-by-side
Showing with 1 addition and 2 deletions
Snakefile
View file @ aeec8e69
...@@ -30,8 +30,7 @@ rule download_imputed_genotype_chromosome: ...@@ -30,8 +30,7 @@ rule download_imputed_genotype_chromosome:
shell: shell:
""" """
mkdir -p output/imputed-genotypes mkdir -p output/imputed-genotypes
gsutil cp gs://fimm-horizon-outgoing-data/CENTER_TBI_data_freeze_191014/Imputed_data/CENTER.TBI_imputed_N3741_hg19_HRC_MAC1_freeze_191014_chr1.vcf.gz gsutil cp gs://fimm-horizon-outgoing-data/CENTER_TBI_data_freeze_191014/Imputed_data/CENTER.TBI_imputed_N3741_hg19_HRC_MAC1_freeze_191014_chr1.vcf.gz \
\
output/imputed-genotypes/CENTER_TBI_imputed_genotype_chr{wildcards.i}.vcf.gz output/imputed-genotypes/CENTER_TBI_imputed_genotype_chr{wildcards.i}.vcf.gz
""" """
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment