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impute-gene-expression
impute-gene-expression
Commit a1a24f5b authored by Kevin Kunzmann's avatar Kevin Kunzmann
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bugfix

parent 36e4a0ef
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...@@ -105,7 +105,7 @@ rule impute_gene_expressions: ...@@ -105,7 +105,7 @@ rule impute_gene_expressions:
input: input:
"container.sif", "container.sif",
samples_file = expand("{output_dir}/dosages/samples.txt", output_dir = config['output_dir']), samples_file = expand("{output_dir}/dosages/samples.txt", output_dir = config['output_dir']),
dosage_files = expand("{output_dir}/dosages/chr{i}.dosage.txt.gz", i = range(1, 24), output_dir = config['output_dir']) dosage_files = expand("{output_dir}/dosages/chr{i}.dosage.txt.gz", i = range(1, 23), output_dir = config['output_dir'])
output: output:
"{output_dir}/imputed-gene-expressions/{region}.expression.txt" "{output_dir}/imputed-gene-expressions/{region}.expression.txt"
singularity: singularity:
......
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