Commit 6e6180f9 authored by Kevin Kunzmann's avatar Kevin Kunzmann

slightly increase parallelism, still almost half HDD footprint but tissue...

slightly increase parallelism, still almost half HDD footprint but tissue expression imputation now fully parallel
parent 1c1a6672
mkdir -p logs mkdir -p logs
nohup snakemake $1 \ nohup snakemake $1 \
--jobs 12 \ --jobs 13 \
--use-singularity \ --use-singularity \
--cluster-config cluster.json \ --cluster-config cluster.json \
--cluster "sbatch -A {cluster.account} -p {cluster.partition} --ntasks {cluster.ntasks} --cpus-per-task {cluster.ncpu} --nodes {cluster.nodes} -t {cluster.time} --job-name {cluster.name} --output {cluster.output} --error {cluster.error}" & --cluster "sbatch -A {cluster.account} -p {cluster.partition} --ntasks {cluster.ntasks} --cpus-per-task {cluster.ncpu} --nodes {cluster.nodes} -t {cluster.time} --job-name {cluster.name} --output {cluster.output} --error {cluster.error}" &
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