housekeeping

6de7a55b · Kevin · 40a58a6b · 6de7a55b · 6de7a55b
Commit 6de7a55b authored Feb 02, 2019 by Kevin
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Showing with 3 additions and 2 deletions

.gitignore .gitignore +2 -1

snakemake_slurm snakemake_slurm +1 -1

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--- a/.gitignore
+++ b/.gitignore
@@ -5,4 +5,5 @@ output
 *.pdf
 *.Rproj
 *.rds
-*.Rhistory
\ No newline at end of file
+*.Rhistory
+*.out
\ No newline at end of file
--- a/snakemake_slurm
+++ b/snakemake_slurm
 #!/bin/bash
 # single input: snakemake target
-nohup snakemake $1 --use-singularity -j 99 --cluster-config cluster.json --cluster "sbatch -A {cluster.account} -p {cluster.partition} -n {cluster.n} -c {cluster.ncpu} -t {cluster.time}"
+nohup snakemake $1 --use-singularity -j 99 --cluster-config cluster.json --cluster "sbatch -A {cluster.account} -p {cluster.partition} -n {cluster.n} -c {cluster.ncpu} -t {cluster.time}" &