added references + additional descriptive covariates

manuscript/references.bib

-@article{horton2018randomized,
+@article{horton2018,
   title={Randomized controlled trials in adult traumatic brain injury: A systematic review on the use and reporting of clinical outcome assessments},
   author={Horton, Lindsay and Rhodes, Jonathan and Wilson, Lindsay},
   journal={Journal of neurotrauma},
@@ -9,14 +9,14 @@
   publisher={Mary Ann Liebert, Inc. 140 Huguenot Street, 3rd Floor New Rochelle, NY 10801 USA}
 }
 
-@article{richter2019handling,
+@article{richter2019,
   title={Handling missing outcome data in traumatic brain injury research-a systematic review},
   author={Richter, Sophie and Stevenson, Susan and Newman, Tom and Wilson, Lindsay and Menon, David and Maas, Andrew and Nieboer, Daan and Lingsma, Hester and Steyerberg, Ewout and Newcombe, Virginia},
   year={2019},
   publisher={Mary Ann Liebert Inc.}
 }
 
-@article{white2010bias,
+@article{white2010,
   title={Bias and efficiency of multiple imputation compared with complete-case analysis for missing covariate values},
   author={White, Ian R and Carlin, John B},
   journal={Statistics in medicine},
@@ -102,6 +102,7 @@
   pages={36--47},
   year={2014},
   publisher={American Medical Association}
+}
 
 @article{center2015collaborative,
   title={Collaborative European neurotrauma effectiveness research in traumatic brain injury (CENTER-TBI): A prospective longitudinal observational study},
@@ -175,7 +176,6 @@
   pages={2520--2522},
   year={2012},
   publisher={Oxford University Press}
->>>>>>> 943d2c27a63fd82c265933c46a0d6ab674191f03
 }
 
 
@@ -242,8 +242,33 @@ year = {2017}
 author = {Agresti, Alan},
 editor = {{John Wiley {\&} Sons}},
 title = {{Categorical data analysis}},
-year = {2003}
+year =
+{2003}
+}
+
+@article{steyerberg2008,
+  title={Predicting outcome after traumatic brain injury: development and international validation of prognostic scores based on admission characteristics},
+  author={Steyerberg, Ewout W and Mushkudiani, Nino and Perel, Pablo and Butcher, Isabella and Lu, Juan and McHugh, Gillian S and Murray, Gordon D and Marmarou, Anthony and Roberts, Ian and Habbema, J Dik F and others},
+  journal={PLoS medicine},
+  volume={5},
+  number={8},
+  pages={e165},
+  year={2008},
+  publisher={Public Library of Science}
+}
+
+@article{meira2009,
+  title={Multi-state models for the analysis of time-to-event data},
+  author={Meira-Machado, Lu{\'\i}s and de U{\~n}a-{\'A}lvarez, Jacobo and Cadarso-Suarez, Carmen and Andersen, Per K},
+  journal={Statistical methods in medical research},
+  volume={18},
+  number={2},
+  pages={195--222},
+  year={2009},
+  publisher={SAGE Publications Sage UK: London, England}
 }
+
+
 @article{brms2018,
 author = {B{\"{u}}rkner, Paul},
 journal = {The R Journal},
@@ -253,6 +278,7 @@ title = {{Advanced Bayesian Multilevel Modeling with the R Package brms}},
 volume = {10},
 year = {2018}
 }
+
 @article{brms2017,
 author = {B{\"{u}}rkner, Paul},
 journal = {Journal Of Statistical Software},
@@ -262,6 +288,7 @@ title = {{brms: An R Package for Bayesian Multilevel Models Using Stan}},
 volume = {80},
 year = {2017}
 }
+
 @article{Steyerberg2008,
 author = {Steyerberg, Ewout W and Mushkudiani, Nino and Perel, Pablo and Butcher, Isabella and Lu, Juan and McHugh, Gillian S and Murray, Gordon D and Marmarou, Anthony and Roberts, Ian and Habbema, J. Dik F and Maas, Andrew I. R},
 doi = {10.1371/journal.pmed.0050165},

scripts/download_v1.1.sh

@@ -39,3 +39,10 @@ curl \
   --digest https://center-tbi.incf.org/api/data/_5c548a5b6b3f2f22e14d20a2.csv > \
   $OUT/df_baseline.csv
 Rscript -e "library(tidyverse); saveRDS(as_tibble(read_csv('$OUT/df_baseline.csv')), file = '$OUT/df_baseline.rds')"
+
+# baseline descriptive
+curl \
+  --user $NEUROBOT_USR:$NEUROBOT_API \
+  --digest https://center-tbi.incf.org/api/data/_5cc703eb3a4c5139c387f8b5.csv > \
+  $OUT/df_baseline_descriptive.csv
+Rscript -e "library(tidyverse); saveRDS(as_tibble(read_csv('$OUT/df_baseline_descriptive.csv')), file = '$OUT/df_baseline_descriptive.rds')"