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GOSe-6mo-imputation-paper
GOSe-6mo-imputation-paper
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dockerfile 942 Bytes
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FROM rocker/verse:latest

MAINTAINER Kevin Kunzmann kevin.kunzmann@mrc-bsu.cam.ac.uk

# update apt
RUN sudo apt-get update

# install prerequisits
RUN sudo apt-get -y install libcurl4-openssl-dev

# install required R packages
RUN R -e "install.packages('rstan')"
RUN R -e "install.packages('brms')"
RUN R -e "install.packages('mice')"
RUN R -e "install.packages('ggalluvial')"
RUN R -e "install.packages('caret')"
RUN R -e "install.packages('msm')"
RUN R -e "install.packages('cowplot')"
RUN R -e "install.packages('opal', repos=c('https://cran.rstudio.com/', 'https://cran.obiba.org'), dependencies=TRUE)"
RUN R -e "devtools::install_github('kkmann/centertbi')"
RUN R -e "devtools::install_github('kkmann/reportr')" 
RUN R -e "devtools::install_github('kkmann/describr')"

# install missing tex packages for fancy report
RUN tlmgr update --self
RUN tlmgr install koma-script psnfss enumitem xcolor lastpage float placeins beamer translator