Commit 69324e04 authored by Kevin Kunzmann's avatar Kevin Kunzmann

docs updated

parent 150c9896
...@@ -18,10 +18,8 @@ git clone https://git.center-tbi.eu/kunzmann/gose-6mo-imputation-production.git ...@@ -18,10 +18,8 @@ git clone https://git.center-tbi.eu/kunzmann/gose-6mo-imputation-production.git
cd gose-6mo-imputation-production cd gose-6mo-imputation-production
``` ```
Open this folder in Rstudio. This should activate the prepared Open this folder in Rstudio. This should activate the prepared
R environment automatically and locall;y install any R package dependencies. R environment automatically.
See the documentation for [renv](https://rstudio.github.io/renv/articles/renv.html) The required R environment can then be restored manually by invoking
in case of problems.
The required R environment can also be restored manually by invoking
``` ```
install.packages("renv") install.packages("renv")
renv::restore(clean = TRUE, prompt = FALSE) renv::restore(clean = TRUE, prompt = FALSE)
...@@ -29,6 +27,8 @@ renv::restore(clean = TRUE, prompt = FALSE) ...@@ -29,6 +27,8 @@ renv::restore(clean = TRUE, prompt = FALSE)
in an R console with working directory set to `[my-working-direcrtory]/gose-6mo-imputation-production` in an R console with working directory set to `[my-working-direcrtory]/gose-6mo-imputation-production`
where `[my-working-direcrtory]` is the location on yur file system that you where `[my-working-direcrtory]` is the location on yur file system that you
placed the repository in. placed the repository in.
See the documentation for [renv](https://rstudio.github.io/renv/articles/renv.html)
in case of problems.
To execute the markdown file the recorded GOSe values are required To execute the markdown file the recorded GOSe values are required
in a .csv file named `tbl_gose.csv` in the same folder, i.e. `[my-working-direcrtory]/gose-6mo-imputation-production/tbl_gose.csv`. in a .csv file named `tbl_gose.csv` in the same folder, i.e. `[my-working-direcrtory]/gose-6mo-imputation-production/tbl_gose.csv`.
......
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