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impute-gene-expression
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Kevin Kunzmann
impute-gene-expression
Commits
e738e819
Commit
e738e819
authored
Mar 14, 2020
by
Kevin Kunzmann
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@@ -76,7 +76,7 @@ for reference.
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@@ -76,7 +76,7 @@ for reference.
4.
Adjust tissues, data date, and target cohort in
`config/parameters.yaml`
4.
Adjust tissues, data date, and target cohort in
`config/parameters.yaml`
4.
Run the pipeline
4.
Run the pipeline
```
```
singularity exec -H $PWD
-j 1 [container-name].sif snakemake
all
singularity exec -H $PWD
[container-name].sif snakemake -j 1
all
```
```
Here
`-j 1`
specifies the maximal number of parallel jobs.
Here
`-j 1`
specifies the maximal number of parallel jobs.
Increase this on more powerful machines but bear in mind that roughly 16Gb
Increase this on more powerful machines but bear in mind that roughly 16Gb
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