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impute-gene-expression
impute-gene-expression
Commit 2eec8369 authored by Kevin Kunzmann's avatar Kevin Kunzmann
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scripts/singularity.def
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...@@ -45,7 +45,7 @@ From: rocker/verse:3.6.2 ...@@ -45,7 +45,7 @@ From: rocker/verse:3.6.2
chmod +x /usr/bin/predixcan chmod +x /usr/bin/predixcan
pip3 install \ pip3 install \
numpy==1.18.1 scipy==1.4.1 pandas==1.0.1 mock==4.0.1 sqlalchemy==1.3.13 \ numpy==1.18.1 scipy==1.4.1 pandas==1.0.1 mock==4.0.1 sqlalchemy==1.3.13 \
patsy==0.5.1 statsmodels==0.11.1 h5py==2.10.0 h5py-cache==1.0.1 patsy==0.5.1 statsmodels==0.11.1 h5py==2.10.0 h5py-cache==1.0
# download, extract and store weights # download, extract and store weights
apt-get -y install wget apt-get -y install wget
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