Bootstrap: docker

From: rocker/verse:latest



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    Maintainer Kevin Kunzmann kevin.kunzmann@mrc-bsu.cam.ac.uk



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    CENTER-TBI 6 months GOSe outcome imputation, 
    cf. https://git.center-tbi.eu/kunzmann/gose-6mo-imputation for details.



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    apt-get update

    apt-get -y install curl python3-pip
    pip3 install snakemake

    R -e "install.packages('diagram')"
    R -e "install.packages('rstan')"
    R -e "install.packages('brms')"
    R -e "install.packages('mice')"
    R -e "install.packages('ggalluvial')"
    R -e "install.packages('caret')"
    R -e "install.packages('e1071')"
    R -e "install.packages('msm')"
    R -e "install.packages('cowplot')"
    R -e "install.packages('pander')"
    R -e "devtools::install_github('kkmann/describr')"