Skip to content
Projects
Groups
Snippets
Help
Loading...
Help
Support
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
G
GOSe-6mo-imputation
Project overview
Project overview
Details
Activity
Releases
Cycle Analytics
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Charts
Issues
0
Issues
0
List
Boards
Labels
Milestones
Merge Requests
0
Merge Requests
0
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Charts
Create a new issue
Commits
Issue Boards
Open sidebar
Kevin Kunzmann
GOSe-6mo-imputation
Commits
326fb908
Commit
326fb908
authored
Apr 15, 2019
by
Kevin
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
fixed issue with container
parent
ddd3fd6f
Changes
4
Show whitespace changes
Inline
Side-by-side
Showing
4 changed files
with
19 additions
and
0 deletions
+19
-0
container-recipe
container-recipe
+4
-0
scripts/build-image
scripts/build-image
+3
-0
scripts/check-inputs.R
scripts/check-inputs.R
+0
-0
scripts/download-container
scripts/download-container
+12
-0
No files found.
container-recipe
View file @
326fb908
...
...
@@ -24,4 +24,8 @@ From: rocker/verse:latest
apt-get -y install curl python3-pip
pip3 install snakemake
R -e "devtools::install_github('tidyverse/tidyr')"
R -e "install.packages('diagram')"
R -e "install.packages('caret')"
R -e "install.packages('e1071')"
R -e "install.packages('msm')"
scripts/build-image
0 → 100755
View file @
326fb908
#!/bin/bash
sudo
singularity build container.sif container-recipe
scripts/check-inputs.R
100644 → 100755
View file @
326fb908
File mode changed from 100644 to 100755
scripts/download
_
container
→
scripts/download
-
container
View file @
326fb908
...
...
@@ -2,11 +2,11 @@
set
-e
wget https://zenodo.org/record/26
00385
/files/container.sif
wget https://zenodo.org/record/26
41161
/files/container.sif
checksum
=(
$(
md5sum
container.sif
)
)
if
[
$checksum
!=
7db125c9c83621d78981e558546b1e88
]
;
then
if
[
$checksum
!=
4d7edd4ff6ba7c8ff7639c53e7c6daf9
]
;
then
echo
md5 mismatch!
exit
1
fi
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment